GeneGo
Systems Biology and Pathway Analysis
 
Differential protein expression
in androgen-treated prostate cancer cell lines (Dezso et al.). Mapped with GeneGo software.
 
GeneGo offers bioinformatics technology solutions for systems biology and pathway analysis. Their products enable the reconstruction of mammalian cellular functionality at three levels:

  • Stimuli (ligand-receptor interactions)
  • Cell signaling and regulation
  • Effect (core metabolism)

With GeneGo software, experimental data can be analyzed to deduce pathways, genes, proteins and metabolites most relevant for specific diseases.

 
The Bioinformatics Center currently supports GeneGo's MetaCore application. MetaCore allows data analysis for:
  • microarray and SAGE gene expression
  • SNPs and CGH arrays
  • proteomics
  • metabolomics
  • pathway analysis
  • Y2H and other custom interactions
 
MetaCore is based on manually curated databases of:
  • human protein-protein interactions
  • protein-DNA interactions
  • protein compound interactions
  • metabolic and signaling pathways
  • the effects of bioactive molecules in gene expression
 
Accounts
The Bioinformatics Center can set up accounts for you to access and use MetaCore.
 
GeneGo Website
For more information about GeneGo, visit the GeneGo vendor website. And for MetaCore see the MetaCore webpage.
 
For more information contact:
Andrey Ptitsyn, PhD
Ph: 970-491-0878
Email: andrey.ptitsyn@colostate.edu
 

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Fort Collins, Colorado 80523
Maintained by Richard Casey